Species,"Lithospermum officinale" "Sample Location","in the natural environment of Chiba University,Japan (located at 35°36′17.7″ N; 140°08′06.9″ E) " "Sample Part","leaf, stem, and root" "Sequencing platform","Illumina Hi-Seq 2000" "Sequencing data","4 Gb raw reads" "Assembly software","Trinity, CLC Genomics Workbench, SOAP" "Assembly result","77,047 unigenes with minimum and maximum se"Assembly software",Trinity "Assembly result","151,924 'Trinity' genes and 106,275 unigenes, ranged from 201 to 15,668 bp in length, the average length of unigenes was 676 bp, N50 of 1,121 bp" "Annotation Method","NT, NR, Uniprot database, RNAMMER, eggnog, GO, KEGG"